Blood was first shed in the kingdom of Hirando. Fathers Carrioni and Martel were poisoned, and Carvalho and Furnaletto, who took their places, met the same fate. A fifth, whose name is lost, was killed in a similar fashion. Unfortunately, the Spanish merchants in the Philippines just at that time induced the Franciscan missionaries of those islands to go over to Japan, for the rumor had got abroad that the Jesuits in Japan had been wholly exterminated, although there were still, in reality, twenty-six of them in the country. It is true they were not in evidence as formerly, for with the exception of the two army chaplains, they were exercising their ministry secretly. Of that, however, the Spaniards were not aware and probably spoke in good faith. The Franciscans, on arriving, discovered that they had been duped in believing that the persecution was prompted by dislike of the Jesuits' personality, some of whom no doubt they met. Nevertheless, they determined to remain, and Taicosama permitted them to do so, because of the letters they carried from the Governor of the Philippines, who expressed a desire of becoming Taicosama's vassal. Meantime, a Spanish captain whose vessel had been wrecked on the coast had foolishly said that the sending of missionaries to Japan was only a device to prepare for a Portuguese and Spanish invasion. Possibly he spoke in jest, but his words were reported to Taicosama, with the result that on February 5, 1597, six Franciscans and three Jesuits were hanging on crosses at Nagasaki. The Jesuits were Paul Miki, James Kisai, and John de Goto, all three Japanese. On the same day a general decree of banishment was issued.
Just then Valignani, who had withdrawn, returned to Japan with nine more Jesuits and the coadjutor of the first bishop of Japan--the bishop having died on the way out. Valignani, who was personally very acceptable to Taicosama, was cordially received and the storm ceased momentarily; but unfortunately, Taicosama died a year afterwards and, strange to say, two Jesuit priests, Rodrigues and Organtini, who had won his affection, were with him when he breathed his last, but they failed to make any impression on his mind or heart. He left a son, and Daifusama became regent or Shogun. Fortunately, Valignani had some success in convincing him that to establish himself firmly on his throne it would be wise to extend his protection to his Christian subjects. Moreover, the King of Hirando, though at first bent on continuing the persecution, was constrained by the threatening attitude of his Christian subjects, who were very numerous and very powerful in his kingdom, to desist from his purpose, at least for a while. Probably he was assisted in this resolution by the fact that in the first year after the outburst, namely in 1599, seventy thousand more Japanese had asked for baptism. In 1603 there were 10,000 conversions in the single principality of Fingo.